GET THE APP

Microbiome: Health, Disease, and Precision Engineering
Hepatology and Pancreatic Science

Hepatology and Pancreatic Science

ISSN: 2573-4563

Open Access

Perspective - (2025) Volume 9, Issue 2

Microbiome: Health, Disease, and Precision Engineering

Priya Ananthakrishnan*
*Correspondence: Priya Ananthakrishnan, Institute of Gastroenterological Sciences, Chennai Institute of Medical Research, India, Email:
Institute of Gastroenterological Sciences, Chennai Institute of Medical Research, India

Received: 01-Mar-2025, Manuscript No. hps-25-172146; Editor assigned: 03-Mar-2025, Pre QC No. hps-25-172146; Reviewed: 17-Dec-2025, QC No. hps-25-172146; Revised: 22-Mar-2025, Manuscript No. hps-25-172146; Published: 29-Mar-2025 , DOI: 10.37421/2573-4563.2024.9.328
Citation: Ananthakrishnan, Priya. ”Microbiome Health, Disease and Precision Engineering.” J Hepatol Pancreat Sci 09 (2025):328.
Copyright: © 2025 Ananthakrishnan P. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution and reproduction in any medium, provided the original author and source are credited.

Introduction

The human gut microbiota is a complex ecosystem playing a crucial role in maintaining host health. Recent research highlights its involvement in various physiological processes, including metabolism, immunity, and brain function. Dysbiosis, an imbalance in this microbial community, is increasingly linked to numerous diseases, from inflammatory bowel disease to neurodegenerative disorders, emphasizing the potential for microbiota modulation as a therapeutic strategy [1].

The gut microbiome significantly influences the efficacy and toxicity of cancer immunotherapies. Commensal bacteria can modulate host immune responses, impacting tumor progression and the success of treatments like immune checkpoint inhibitors. Understanding these intricate interactions opens avenues for microbiome-targeted interventions to improve patient outcomes in oncology [2].

Dietary habits profoundly shape the composition and function of the gut microbiota, which in turn influences host metabolism. Recent findings reveal how specific dietary components, such as fibers and fermented foods, can modulate microbial communities, affecting nutrient absorption, energy balance, and the production of beneficial metabolites. This understanding underscores the therapeutic potential of dietary interventions for metabolic health [3].

The gut-brain axis is a bidirectional communication system, heavily influenced by the gut microbiome, with significant implications for neurodevelopment and neurodegenerative diseases. Emerging evidence suggests that microbial metabolites, immune activation, and neural pathways mediate this complex interaction, affecting brain function, behavior, and the pathogenesis of conditions like Parkinson's and Alzheimer's diseases [4].

The skin microbiome, a diverse community of microorganisms residing on the skin surface, plays a pivotal role in maintaining skin homeostasis and influencing the development of dermatological conditions. Recent studies have unveiled its involvement in barrier function, immune modulation, and disease susceptibility, highlighting its therapeutic potential in managing conditions like eczema, acne, and psoriasis [5].

The oral microbiome, a distinct microbial ecosystem, is increasingly recognized for its influence on systemic health beyond the oral cavity. Dysbiosis in the oral microbiome can contribute to inflammatory conditions, impacting the gut microbiome and potentially exacerbating or initiating systemic diseases such as cardiovascular disease, diabetes, and certain cancers through shared inflammatory pathways [6].

The human gut microbiome serves as a major reservoir for antibiotic resistance genes, posing a significant public health threat. Antibiotic exposure can disrupt the delicate balance of the gut microbiota, promoting the selection and spread of resistant bacteria, which can then transfer these resistance genes to pathogens, complicating the treatment of bacterial infections [7].

Short-chain fatty acids (SCFAs), primarily acetate, propionate, and butyrate, are key metabolites produced by the gut microbiota through the fermentation of dietary fibers. These SCFAs are crucial for host health, influencing energy metabolism, gut barrier integrity, and immune responses. Dysregulation in SCFA production is linked to various metabolic and inflammatory disorders, highlighting their therapeutic potential [8].

The maternal microbiome, encompassing microbial communities from the gut, vagina, and oral cavity, plays a critical role in maternal health during pregnancy and in shaping the developing infant's microbiome and immune system. Perturbations in the maternal microbiome are associated with adverse pregnancy outcomes and an increased risk of chronic diseases in offspring, emphasizing the importance of a healthy maternal microbial environment [9].

Precision microbiome engineering, utilizing synthetic biology tools, offers unprecedented opportunities to rationally design and manipulate microbial communities for therapeutic applications. This field aims to create targeted interventions, from engineered probiotics to personalized microbial consortia, to restore microbial balance and treat diseases with greater efficacy and specificity [10].

Description

The human gut microbiota acts as a complex ecosystem that is crucial for maintaining host health, influencing metabolism, immunity, and brain function. An imbalance in this microbial community, known as dysbiosis, is increasingly linked to numerous diseases, from inflammatory bowel disease to neurodegenerative disorders, suggesting that microbiota modulation could be a therapeutic strategy [1]. Dietary habits profoundly shape the composition and function of the gut microbiota, which in turn influences host metabolism. Specific dietary components, like fibers and fermented foods, can modulate microbial communities, affecting nutrient absorption, energy balance, and the production of beneficial metabolites [3]. Short-chain fatty acids (SCFAs), including acetate, propionate, and butyrate, are key metabolites produced by the gut microbiota through the fermentation of dietary fibers. These SCFAs are vital for host health, impacting energy metabolism, gut barrier integrity, and immune responses, with dysregulation in their production linked to various metabolic and inflammatory disorders [8].

The gut microbiome plays a significant role in influencing the efficacy and toxicity of cancer immunotherapies. Commensal bacteria can modulate host immune responses, affecting tumor progression and the success of treatments such as immune checkpoint inhibitors, opening new avenues for microbiome-targeted interventions in oncology [2]. There is also a bidirectional communication system known as the gut-brain axis, heavily influenced by the gut microbiome, which has significant implications for neurodevelopment and neurodegenerative diseases. Evidence points to microbial metabolites, immune activation, and neural pathways mediating this complex interaction, affecting brain function, behavior, and the pathogenesis of conditions like Parkinson's and Alzheimer's diseases [4].

The skin microbiome, a diverse community residing on the skin surface, is pivotal in maintaining skin homeostasis and influencing dermatological conditions. Recent studies highlight its involvement in barrier function, immune modulation, and disease susceptibility, suggesting therapeutic potential in managing conditions like eczema, acne, and psoriasis [5]. Similarly, the oral microbiome is a distinct microbial ecosystem whose influence extends beyond the oral cavity to systemic health. Dysbiosis in the oral microbiome can contribute to inflammatory conditions, potentially impacting the gut microbiome and exacerbating systemic diseases such as cardiovascular disease, diabetes, and certain cancers through shared inflammatory pathways [6].

The human gut microbiome is also a major reservoir for antibiotic resistance genes, posing a significant public health threat. Antibiotic exposure can disrupt the delicate balance of the gut microbiota, promoting the selection and spread of resistant bacteria, which can then transfer these resistance genes to pathogens, complicating treatment of bacterial infections [7]. Furthermore, the maternal microbiome, encompassing microbial communities from the gut, vagina, and oral cavity, plays a critical role in maternal health during pregnancy and in shaping the developing infant's microbiome and immune system. Perturbations in the maternal microbiome are associated with adverse pregnancy outcomes and an increased risk of chronic diseases in offspring [9].

Looking to the future, precision microbiome engineering, utilizing synthetic biology tools, presents opportunities to rationally design and manipulate microbial communities for therapeutic applications. This field aims to create targeted interventions, from engineered probiotics to personalized microbial consortia, to restore microbial balance and treat diseases with greater efficacy and specificity [10].

Conclusion

The human gut microbiota forms a crucial, intricate ecosystem fundamental to host health, impacting metabolic processes, immune responses, and brain function. Dysbiosis, an imbalance in this microbial community, has clear associations with a spectrum of diseases, ranging from inflammatory bowel disease to various neurodegenerative disorders, emphasizing the potential for therapeutic modulation. Beyond the gut, other specialized microbial communities, such as those found on the skin and within the oral cavity, also exert significant influence on both localized and systemic health. The skin microbiome is integral to maintaining skin homeostasis and influences dermatological conditions like eczema, acne, and psoriasis. Similarly, imbalances in the oral microbiome can contribute to inflammatory states, potentially impacting the gut and exacerbating conditions like cardiovascular disease and diabetes. Dietary patterns are powerful modulators of gut microbiota composition and function. Specific components, particularly fibers, drive the production of beneficial metabolites like short-chain fatty acids (SCFAs), which are vital for energy metabolism, gut barrier integrity, and robust immune responses. Furthermore, the maternal microbiome, encompassing multiple body sites, plays a pivotal role in maternal health during pregnancy and critically shapes the developing infant's microbiome and immune system, with implications for offspring health. The gut microbiome's influence extends to critical areas like oncology, where it significantly impacts the efficacy and toxicity of cancer immunotherapies. It also underpins the gut-brain axis, a bidirectional communication system with profound implications for neurodevelopment and the progression of conditions like Parkinson's and Alzheimer's. A pressing public health issue involves the gut microbiome acting as a significant reservoir for antibiotic resistance genes, complicating bacterial infection treatments. To address these complex interactions and dysbiosis-related diseases, precision microbiome engineering is emerging. This field leverages synthetic biology tools to rationally design and manipulate microbial communities, aiming to create highly targeted interventions like engineered probiotics or personalized microbial consortia to restore microbial balance and treat diseases with greater specificity and effectiveness.

Acknowledgement

None

Conflict of Interest

None

References

  • Ron S, Eyal F, Rotem M. "The human gut microbiota and its relationship with health and disease.".Trends Immunol. 40 (2019):98-111.
  • Indexed at, Google Scholar, Crossref

  • Bertrand R, Vancheswaran G, Romain D. "Targeting the Microbiome in Cancer Immunotherapy.".Cancer Cell 40 (2022):472-489.
  • Indexed at, Google Scholar, Crossref

  • Paul WO, Andre GB, Glenn RG. "Diet and the gut microbiota: an update on the latest evidence and clinical implications.".Gut 69 (2020):1314-1317.
  • Indexed at, Google Scholar, Crossref

  • John FC, Katie JO, Chloe SMC. "The Gut Microbiome-Brain Axis in Neurodevelopment and Neurodegeneration.".Trends Neurosci. 46 (2023):128-140.
  • Indexed at, Google Scholar, Crossref

  • Julia O, Ally LB, Monica P. "The skin microbiome: a master regulator of skin health and disease.".Cell Host Microbe 32 (2024):189-204.
  • Indexed at, Google Scholar, Crossref

  • Shogo K, Takashi K, Haruna N. "Oral Microbiome and Systemic Health: An Interplay between Oral and Gut Dysbiosis.".Cell Host Microbe 27 (2020):522-530.
  • Indexed at, Google Scholar, Crossref

  • John vdO, Cornelis B, Jan DvE. "Human gut microbiome-associated antibiotic resistance: a public health concern.".Future Microbiol. 14 (2019):627-640.
  • Indexed at, Google Scholar, Crossref

  • Hong Z, Yu Z, Yang W. "Short-Chain Fatty Acids and Gut Microbiota: From Health to Disease.".Front Cell Dev Biol. 8 (2020):28.
  • Indexed at, Google Scholar, Crossref

  • Alexia LP, Kjersti MA, Jing M. "The maternal microbiome: implications for pregnancy and infant health.".Semin Immunopathol. 41 (2019):281-291.
  • Indexed at, Google Scholar, Crossref

  • Jooyoung S, Hyelim L, Seong HL. "Precision microbiome engineering: leveraging the power of synthetic biology.".Trends Biotechnol. 41 (2023):399-413.
  • Indexed at, Google Scholar, Crossref

    arrow_upward arrow_upward